If you reply to this email, your message will be added to the discussion below: I was also previously able to run a copy of ImageJ from a thumb drive copied from my work desktop Dell computer but that is a no go any longer as well.
There is a bug in Java 8 on MacOS which causes the application to drastically slow down as many windows are opened and closed over time. If you have difficulties, please post on the At any time, you can verify which Javas are installed on your system using Unfortunately, El Capitan has some new java-related issues. To unsubscribe from Cannot see plugins in my ImajeJ plugin folder on Mac, Thanks a lot. Error creating thumbnail: Unable to save thumbnail to destination Installing ImageJ and no FIJI? This page was last modified on 22 October 2018, at 14:53. If there is no solution, and I need to use ImageJ, is there something I can do like reinstalling? Alternately, ImageJ still works on El Capitan with Java 6 (see above).
In that case, the display is scaled to the full 16-bit range (0 - 65535 intensity values), even though the actual data values typically span a much smaller range. If you upgraded to El Capitan and your Java 8 installation is not being detected properly: It`s amazing! (There are also On macOS 10.11 "El Capitan" and later, the operating system no longer includes a title bar for file chooser dialogs. This is a read-only version of, available during the transition to a new site. We have it on another computer in our lab and it seems to be easy to use.On Sat, at 4:07 AM, Curtis Rueden > If you reply to this email, your message will be added to the discussion I am also looking into Fiji. The name of the file in my ImageJ plugins folder is correct and I didn`t need to change it or unzip it. You are right, it did seem like an installation issue.
I tried to download the ImageJ-ND Viewer plugin.ms1 file but the system will not open the installation file indicating it needs to be. We have it on another computer in our lab and it seems to be easy to use.On Sat, at 4:07 AM, Curtis Rueden > If you reply to this email, your message will be added to the discussion However, when I open ImageJ which I have very recently installed, I cannot see anything at all in the Plugins pull-down menu. ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. However, when I open ImageJ > which I have very recently installed, I cannot see anything at all in the > Plugins pull-down menu. I also cannot open microscopy files by drag and dropping them onto ImageJ. On recent versions of OS Xâ≁0.9 "Mavericks" and laterâthere is an "App Nap" feature which dramatically slows down applications that are not in the foreground. On OS X, older versions of Java 8 (prior to 1.8.0_45)âas well as all versions of Java 7 (including 1.7.0_80)âare extremely slow at displaying images. From the ImageJ wiki's Troubleshooting page: This problem can arise when 12-bit, 14-bit or 16-bit images are loaded into ImageJ without autoscaling. You can disable path randomization by dragging ImageJ.app to another folder and then (optionally) dragging it back.
As a workaround, you can check "Use JFileChooser to open/save" in the It is unfortunately no longer feasible to install Apple Java 6 on current versions of macOS. It has everything I need and it is very easy to use.
I never had this type of problem when I was using windows. To run ImageJ, double-click on the ImageJ icon. Download and expand the Macintosh self-extracting archive.
There is a 2 gigapixel limit when opening and displaying image planes using the ImageJ 1.x user interface's default image viewer. Path Randomizationthat can cause ImageJ to not work as expected. However, ImageJ should work OK with Java 8. Leave ImageJ in the foreground while it is processing to avoid this issue. Drag the 3 items (Fiji.app, and the plugins and macros symlinks) into the /Applications/Fiji folder.